Course on Integrative BioInformatics given Jan 8- 10, 2003 at the University of Amsterdam by Hans V. Westerhoff, with input from Frank Bruggeman, Jacky L. Snoep and Barbara M. Bakker

Presentation material:

· Powerpoint presentation part 1 (kinetic modelling)

· Powerpoint presentation part 2 (control analyses)

· Powerpoint presentation part 3 (dynamics)

Training, exercises:

· Exercises on kinetic modeling and MCA using the Silicon cell

· Gepasi software

· Modelling exercise using GePaSi

· GePaSi first model file (use only if the above exercise fails)

· Glycolytic oscillations exercises

· GePaSi model file glycolytic oscillations (‘limit_cycle7_course.gps’)

Tests:

· Selftest: to check whether you understood the course includes answers.