function [data, auxData, metaData, txtData, weights] = mydata_Empidonax_oberholseri
%% set metaData
metaData.phylum     = 'Chordata'; 
metaData.class      = 'Aves'; 
metaData.order      = 'Passeriformes'; 
metaData.family     = 'Tyrannidae';
metaData.species    = 'Empidonax_oberholseri'; 
metaData.species_en = 'American dusky flycatcher'; 

metaData.ecoCode.climate = {'BSk', 'Dsa'};
metaData.ecoCode.ecozone = {'THn'};
metaData.ecoCode.habitat = {'0iTi'};
metaData.ecoCode.embryo  = {'Tnpf'};
metaData.ecoCode.migrate = {'Ml'};
metaData.ecoCode.food    = {'biCii', 'xiHs'};
metaData.ecoCode.gender  = {'Dg'};
metaData.ecoCode.reprod  = {'O'};

metaData.T_typical  = C2K(41.6); % K, body temp
metaData.data_0     = {'ab', 'ap', 'aR', 'am', 'Wwb', 'Wwi', 'Ri'}; 
metaData.data_1     = {'t-Ww'}; 

metaData.COMPLETE = 2.5; % using criteria of LikaKear2011

metaData.author   = {'Bas Kooijman'};    
metaData.date_subm = [2018 09 28];              
metaData.email    = {'bas.kooijman@vu.nl'};            
metaData.address  = {'VU University Amsterdam'};   

metaData.author_mod_1  = {'Bas Kooijman'};    
metaData.date_mod_1    = [2022 11 20];              
metaData.email_mod_1   = {'bas.kooijman@vu.nl'};            
metaData.address_mod_1 = {'VU University Amsterdam'};   

metaData.author_mod_2   = {'Bas Kooijman', 'Starrlight Augustine'};    
metaData.date_mod_2     = [2023 07 07];              
metaData.email_mod_2    = {'bas.kooijman@vu.nl'};            
metaData.address_mod_2  = {'VU University, Amsterdam'};   

metaData.curator     = {'Starrlight Augustine'};
metaData.email_cur   = {'starrlight@tecnico.ulisboa.pt'}; 
metaData.date_acc    = [2023 07 07];

%% set data
% zero-variate data

data.ab = 15;    units.ab = 'd';    label.ab = 'age at birth';             bibkey.ab = 'AnAge';   
  temp.ab = C2K(36);  units.temp.ab = 'K'; label.temp.ab = 'temperature';
data.tx = 17;    units.tx = 'd';    label.tx = 'time since birth at fledging'; bibkey.tx = 'PereMort2001';
  temp.tx = C2K(41.6);  units.temp.tx = 'K'; label.temp.tx = 'temperature';
data.tp = 51;    units.tp = 'd';    label.tp = 'time since birth at puberty'; bibkey.tp = 'guess';
  temp.tp = C2K(41.6);  units.temp.tp = 'K'; label.temp.tp = 'temperature';
data.tR = 365;    units.tR = 'd';    label.tR = 'time since birth at 1st brood'; bibkey.tR = 'AnAge';   
  temp.tR = C2K(41.6);  units.temp.tR = 'K'; label.temp.tR = 'temperature';
data.am = 9*365;    units.am = 'd';    label.am = 'life span';          bibkey.am = 'AnAge';   
  temp.am = C2K(41.6);  units.temp.am = 'K'; label.temp.am = 'temperature'; 

data.Wwb = 1.2;   units.Wwb = 'g';   label.Wwb = 'wet weight at birth';    bibkey.Wwb = 'PereMort2001';
data.Wwi = 11;    units.Wwi = 'g';   label.Wwi = 'ultimate wet weight';  bibkey.Wwi = 'PereMort2001';

data.Ri  = 4/365; units.Ri  = '#/d'; label.Ri  = 'maximum reprod rate';    bibkey.Ri  = 'AnAge';   
  temp.Ri = C2K(41.6);  units.temp.Ri = 'K'; label.temp.Ri = 'temperature';
  comment.Ri = '1 clutch per year';
 
% uni-variate data
% time-weight
data.tW = [ ... % time since birth (d), wet weight (g)
0.057	1.186
1.043	1.569
2.029	2.220
3.015	3.108
4.029	3.937
5.016	5.212
5.976	6.308
6.991	7.643
8.005	8.769
8.964	9.598
10.005	10.189
10.936	10.721
11.976	11.074
12.988	11.071
13.946	11.216
14.958	11.362
15.944	11.537
16.927	10.939];  
units.tW   = {'d', 'g'};  label.tW = {'time since birth', 'wet weight'};  
temp.tW    = C2K(41.6);  units.temp.tW = 'K'; label.temp.tW = 'temperature';
bibkey.tW = 'PereMort2001';
  
%% set weights for all real data
weights = setweights(data, []);
weights.tW = weights.tW * 2;

%% set pseudodata and respective weights
[data, units, label, weights] = addpseudodata(data, units, label, weights);
weights.psd.k_J = 0; weights.psd.k = 1;

%% pack auxData and txtData for output
auxData.temp = temp;
txtData.units = units;
txtData.label = label;
txtData.bibkey = bibkey;
txtData.comment = comment;

%% Discussion points
D1 = 'mod_1: v is reduced; food availability taken variable in tW data';
D2 = 'mod_1: Pseudo-data point k is used, rather than k_J; Data set tp and parameter t_R are added, the latter replacing clutch interval t_N. Postnatal T is based on PrinPres1991, see <a href="https://debtool.debtheory.org/lib/pet/html/get_T_Aves.html">get_T_Aves</a>. See further the <a href="https://debportal.debtheory.org/docs/Revision.html">revision page, theme puberty</a>';
metaData.discussion = struct('D1',D1, 'D2',D2);

%% Links
metaData.links.id_CoL = '39HWL'; % Cat of Life
metaData.links.id_ITIS = '178346'; % ITIS
metaData.links.id_EoL = '45510904'; % Ency of Life
metaData.links.id_Wiki = 'Empidonax_oberholseri'; % Wikipedia
metaData.links.id_ADW = 'Empidonax_oberholseri'; % ADW
metaData.links.id_Taxo = '80942'; % Taxonomicon
metaData.links.id_WoRMS = ''; % WoRMS
metaData.links.id_avibase = '499FFF98B510A2C8'; % avibase
metaData.links.id_birdlife = 'american-dusky-flycatcher-empidonax-oberholseri'; % birdlife
metaData.links.id_AnAge = 'Empidonax_oberholseri'; % AnAge

%% References
bibkey = 'Wiki'; type = 'Misc'; bib = ...
'howpublished = {\url{http://en.wikipedia.org/wiki/Empidonax_oberholseri}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'Kooy2010'; type = 'Book'; bib = [ ...  % used in setting of chemical parameters and pseudodata
'author = {Kooijman, S.A.L.M.}, ' ...
'year = {2010}, ' ...
'title  = {Dynamic Energy Budget theory for metabolic organisation}, ' ...
'publisher = {Cambridge Univ. Press, Cambridge}, ' ...
'pages = {Table 4.2 (page 150), 8.1 (page 300)}, ' ...
'howpublished = {\url{../../../bib/Kooy2010.html}}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'PereMort2001'; type = 'Article'; bib = [ ... 
'author = {M. E. Pereyra and M. L. Morton}, ' ... 
'year = {2001}, ' ...
'title = {NESTLING GROWTH AND THERMOREGULATORY DEVELOPMENT IN SUBALPINE DUSKY FLYCATCHERS}, ' ...
'journal = {The Auk}, ' ...
'volume = {118}, ' ...
'pages = {116-136}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'AnAge'; type = 'Misc'; bib = ...
'howpublished = {\url{http://genomics.senescence.info/species/entry.php?species=Empidonax_oberholseri}}';
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];
%
bibkey = 'PrinPres1991'; type = 'Article'; bib = [ ... 
'doi = {10.1016/0300-9629(91)90122-S}, ' ...
'author = {R. Prinzinger and A.Pre{\ss}mar and E. Schleucher}, ' ... 
'year = {1991}, ' ...
'title = {Body temperature in birds}, ' ...
'journal = {Comp. Biochem. Physiol.}, ' ...
'volume = {99A(4)}, ' ...
'pages = {499-506}'];
metaData.biblist.(bibkey) = ['''@', type, '{', bibkey, ', ' bib, '}'';'];

