| Danio rerio | date: 2023/05/13 | ||||
|---|---|---|---|---|---|
| symbol | units | value | °C | func resp | description |
| model | - | abj | NA | NA | typified model |
| T_typical | °C | 20 | NA | NA | typical body temperature |
| T_A | K | 8000 | NA | NA | Arrhenius temperature |
| z | - | 0.22178 | NA | NA | zoom factor |
| F_m | l/d.cm^2 | 6.5 | 20 | NA | {F_m}, max spec searching rate |
| kap_X | - | 0.8 | NA | NA | digestion efficiency of food to reserve |
| kap_P | - | 0.1 | NA | NA | faecation efficiency of food to faeces |
| v | cm/d | 0.0196 | 20 | NA | energy conductance |
| kap | - | 0.35756 | NA | NA | allocation fraction to soma |
| kap_R | - | 0.95 | NA | NA | reproduction efficiency |
| p_M | J/d.cm^3 | 243.001 | 20 | NA | [p_M], vol-spec somatic maint |
| p_T | J/d.cm^2 | 0 | 20 | NA | {p_T}, surf-spec somatic maint |
| k_J | 1/d | 0.002 | 20 | NA | maturity maint rate coefficient |
| E_G | J/cm^3 | 5267.41 | NA | NA | [E_G], spec cost for structure |
| E_Hb | J | 0.7925 | NA | NA | maturity at birth |
| E_Hj | J | 37.26 | NA | NA | maturity at metam |
| E_Hp | J | 2361 | NA | NA | maturity at puberty |
| h_a | 1/d^2 | 8.97e-10 | 20 | NA | Weibull aging acceleration |
| s_G | - | 0.029882 | NA | NA | Gompertz stress coefficient |
| d_X | g/cm^3 | 0.2 | NA | NA | specific density of food |
| d_V | g/cm^3 | 0.2 | NA | NA | specific density of structure |
| d_E | g/cm^3 | 0.2 | NA | NA | specific density of reserve |
| d_P | g/cm^3 | 0.2 | NA | NA | specific density of faeces |
| mu_X | J/ mol | 525000 | NA | NA | chemical potential of food |
| mu_V | J/ mol | 500000 | NA | NA | chemical potential of structure |
| mu_E | J/ mol | 550000 | NA | NA | chemical potential of reserve |
| mu_P | J/ mol | 480000 | NA | NA | chemical potential of faeces |
| mu_C | J/ mol | 0 | NA | NA | chemical potential of CO2 |
| mu_H | J/ mol | 0 | NA | NA | chemical potential of H2O |
| mu_O | J/ mol | 0 | NA | NA | chemical potential of O2 |
| mu_N | J/ mol | 0 | NA | NA | chemical potential of N-waste |
| n_CX | - | 1 | NA | NA | chem. index of carbon in food |
| n_HX | - | 1.8 | NA | NA | chem. index of hydrogen in food |
| n_OX | - | 0.5 | NA | NA | chem. index of oxygen in food |
| n_NX | - | 0.15 | NA | NA | chem. index of nitrogen in food |
| n_CV | - | 1 | NA | NA | chem. index of carbon in structure |
| n_HV | - | 1.8 | NA | NA | chem. index of hydrogen in structure |
| n_OV | - | 0.5 | NA | NA | chem. index of oxygen in structure |
| n_NV | - | 0.15 | NA | NA | chem. index of nitrogen in structure |
| n_CE | - | 1 | NA | NA | chem. index of carbon in reserve |
| n_HE | - | 1.8 | NA | NA | chem. index of hydrogen in reserve |
| n_OE | - | 0.5 | NA | NA | chem. index of oxygen in reserve |
| n_NE | - | 0.15 | NA | NA | chem. index of nitrogen in reserve |
| n_CP | - | 1 | NA | NA | chem. index of carbon in faeces |
| n_HP | - | 1.8 | NA | NA | chem. index of hydrogen in faeces |
| n_OP | - | 0.5 | NA | NA | chem. index of oxygen in faeces |
| n_NP | - | 0.15 | NA | NA | chem. index of nitrogen in faeces |
| n_CC | - | 1 | NA | NA | chem. index of carbon in CO2 |
| n_HC | - | 0 | NA | NA | chem. index of hydrogen in CO2 |
| n_OC | - | 2 | NA | NA | chem. index of oxygen in CO2 |
| n_NC | - | 0 | NA | NA | chem. index of nitrogen in CO2 |
| n_CH | - | 0 | NA | NA | chem. index of carbon in H2O |
| n_HH | - | 2 | NA | NA | chem. index of hydrogen in H2O |
| n_OH | - | 1 | NA | NA | chem. index of oxygen in H2O |
| n_NH | - | 0 | NA | NA | chem. index of nitrogen in H2O |
| n_CO | - | 0 | NA | NA | chem. index of carbon in O2 |
| n_HO | - | 0 | NA | NA | chem. index of hydrogen in O2 |
| n_OO | - | 2 | NA | NA | chem. index of oxygen in O2 |
| n_NO | - | 0 | NA | NA | chem. index of nitrogen in O2 |
| n_CN | - | 0 | NA | NA | chem. index of carbon in N-waste |
| n_HN | - | 3 | NA | NA | chem. index of hydrogen in N-waste |
| n_ON | - | 0 | NA | NA | chem. index of oxygen in N-waste |
| n_NN | - | 1 | NA | NA | chem. index of nitrogen in N-waste |
| c_T | - | 1 | 20 | NA | Temperature Correction factor |
| p_Am | J/d.cm^2 | 150.724 | 20 | NA | {p_Am}, spec assimilation flux |
| w_X | g/mol | 23.9 | NA | NA | molecular weight for water-free food |
| w_V | g/mol | 23.9 | NA | NA | molecular weight for water-free structure |
| w_E | g/mol | 23.9 | NA | NA | molecular weight for water-free reserve |
| w_P | g/mol | 23.9 | NA | NA | molecular weight for water-free product (feaces) |
| M_V | mol/cm^3 | 0.0083682 | NA | NA | [M_V], volume-specific mass of structure |
| y_V_E | mol/mol | 0.873771 | NA | NA | yield of structure on reserve |
| y_E_V | mol/mol | 1.14446 | NA | NA | yield of reserve on structure |
| k_M | 1/d | 0.0461329 | 20 | NA | somatic maintenance rate coefficient |
| k | - | 0.043353 | NA | NA | maintenance ratio |
| E_m | J/cm^3 | 7689.98 | NA | NA | [E_m], reserve capacity |
| m_Em | mol/mol | 1.67082 | NA | NA | reserve capacity |
| g | - | 1.91568 | NA | NA | energy investment ratio |
| L_m | cm | 0.22178 | NA | NA | maximum structural length |
| L_T | cm | 0 | NA | NA | heating length (also applies to osmotic work) |
| l_T | - | 0 | NA | NA | scaled heating length |
| ome | - | 1.67082 | NA | NA | \omega, contribution of ash free dry mass of reserve to total ash free dry biomass |
| J_E_Am | mol/d.cm^2 | 0.000274043 | 20 | NA | {J_EAm}, max surface-spec assimilation flux |
| y_E_X | mol/mol | 0.763636 | NA | NA | yield of reserve on food |
| y_X_E | mol/mol | 1.30952 | NA | NA | yield of food on reserve |
| p_Xm | J/d.cm^2 | 188.405 | 20 | NA | {p_Xm}, max spec feeding power |
| J_X_Am | mol/d.cm^2 | 0.000358866 | 20 | NA | {J_XAm}, max surface-spec feeding flux |
| y_P_X | mol/mol | 0.109375 | NA | NA | yield of faeces on food |
| y_X_P | mol/mol | 9.14286 | NA | NA | yield of food on faeces |
| y_P_E | mol/mol | 0.143229 | NA | NA | yield of faeces on reserve |
| eta_XA | mol/J | 2.38095e-06 | NA | NA | mass-power couplers for food on assimilation |
| eta_PA | mol/J | 2.60417e-07 | NA | NA | mass-power couplers for product on assimlation |
| eta_VG | mol/J | 1.58868e-06 | NA | NA | mass-power couplers for structure on growth |
| J_E_M | mol/d.cm^3 | 0.00044182 | 20 | NA | [J_EM], vol-spec somatic maint costs |
| J_E_T | mol/d.cm^2 | 0 | 20 | NA | {J_ET}, surface-spec somatic maint costs |
| j_E_M | mol/d.mol | 0.0527975 | 20 | NA | mass-spec somatic maint costs |
| j_E_J | mol/d.mol | 0.00228893 | 20 | NA | mass-spec maturity maint costs |
| kap_G | - | 0.794338 | NA | NA | \kappa_G, growth efficiency |
| E_V | J/cm^3 | 4184.1 | NA | NA | [E_V], volume-specific energy of structure |
| K | mol X/l | 5.52101e-05 | NA | NA | half-saturation coefficient |
| E_Hb | J | 0.7925 | NA | NA | maturity level at birth |
| M_Hb | mol | 1.44091e-06 | NA | NA | maturity level at birth |
| U_Hb | cm^2.d | 0.00525797 | 20 | NA | scaled maturity level at birth |
| V_Hb | cm^2.d | 0.00818437 | 20 | NA | scaled maturity level at birth |
| u_Hb | - | 0.00493156 | NA | NA | scaled maturity level at birth |
| v_Hb | - | 0.00767629 | NA | NA | scaled maturity level at birth |
| E_Hj | J | 37.26 | NA | NA | maturity level at metamorphosis |
| M_Hj | mol | 6.77455e-05 | NA | NA | maturity level at metamorphosis |
| U_Hj | cm^2.d | 0.247207 | 20 | NA | scaled maturity level at metamorphosis |
| V_Hj | cm^2.d | 0.384794 | 20 | NA | scaled maturity level at metamorphosis |
| u_Hj | - | 0.231861 | NA | NA | scaled maturity level at metamorphosis |
| v_Hj | - | 0.360907 | NA | NA | scaled maturity level at metamorphosis |
| E_Hp | J | 2361 | NA | NA | maturity level at puberty |
| M_Hp | mol | 0.00429273 | NA | NA | maturity level at puberty |
| U_Hp | cm^2.d | 15.6644 | 20 | NA | scaled maturity level at puberty |
| V_Hp | cm^2.d | 24.3827 | 20 | NA | scaled maturity level at puberty |
| u_Hp | - | 14.692 | NA | NA | scaled maturity level at puberty |
| v_Hp | - | 22.8691 | NA | NA | scaled maturity level at puberty |
| t_E | d | 11.3153 | 20 | NA | maximum reserve residence time |
| t_starve | d | 31.6459 | 20 | 0 | maximum survival time when starved |
| s_M | - | 3.41871 | NA | 1 | acceleration factor at f=1 |
| r_j | 1/d | 0.129752 | 20 | 1 | exponential growth rate |
| r_B | 1/d | 0.0101035 | 20 | 1 | von Bertalanffy growth rate |
| W_dWm | g | 0.00790519 | NA | 1 | wet weight at maximum growth |
| dWm | g/d | 0.00102571 | 20 | 1 | maximum growth in wet weight |
| U_E0 | cm^2.d | 0.0120108 | 20 | 1 | scaled initial reserve |
| E_0 | J | 1.81032 | NA | 1 | initial reserve |
| M_E0 | mol | 3.29149e-06 | NA | 1 | initial reserve |
| Wd_0 | g | 7.86666e-05 | NA | 1 | initial dry weight |
| Ww_0 | g | 0.000393333 | NA | 1 | initial wet weight |
| l_b | - | 0.189367 | NA | 1 | scaled structural length at birth |
| L_b | cm | 0.0419978 | NA | 1 | structural length at birth |
| M_Vb | mol | 6.19886e-07 | NA | 1 | structural mass at birth |
| del_Ub | - | 0.314666 | NA | 1 | fraction of reserve left at birth |
| Ww_b | g | 0.000197845 | NA | 1 | wet weight at birth |
| Wd_b | g | 3.9569e-05 | NA | 1 | dry weight at birth |
| E_Wb | J | 0.879589 | NA | 1 | energy content at birth |
| a_b | d | 8.4533 | 20 | 1 | age at birth |
| g_Hb | - | 2.16552 | NA | NA | energy divestment ratio at birth |
| l_j | - | 0.647391 | NA | 1 | scaled structural length at metamorphosis |
| L_j | cm | 0.143578 | NA | 1 | structural length at metamorphosis |
| M_Vj | mol | 2.47685e-05 | NA | 1 | structural mass at metamorphosis |
| M_Ej | mol | 2.47685e-05 | NA | 1 | reserve mass at metamorphosis |
| Ww_j | g | 0.00790519 | NA | 1 | wet weight at metamorphosis |
| Wd_j | g | 0.00158104 | NA | 1 | dry weight at metamorphosis |
| E_Wj | J | 35.1453 | NA | 1 | energy content at metamorphosis |
| a_j | d | 36.8751 | 20 | 1 | age at metamorphosis |
| s_Hbp | - | 0.000335663 | NA | NA | maturity ratio |
| s_HLbp | - | 0.480673 | NA | 1 | maturity density ratio at f=1 |
| l_p | - | 2.13445 | NA | 1 | scaled structural length at puberty |
| L_p | cm | 0.473379 | NA | 1 | structural length at puberty |
| M_Vp | mol | 0.000887685 | NA | 1 | structural mass at puberty |
| M_Ep | mol | 0.00148316 | NA | 1 | reserve mass at puberty |
| Ww_p | g | 0.283317 | NA | 1 | wet weight at puberty |
| Wd_p | g | 0.0566633 | NA | 1 | dry weight at puberty |
| E_Wp | J | 1259.58 | NA | 1 | energy content at puberty |
| a_p | d | 113.001 | 20 | 1 | age at puberty |
| g_Hp | - | 4.50517 | NA | NA | energy divestment ratio at puberty |
| s_s | - | 0.00203803 | NA | 1 | supply stress |
| l_i | - | 3.41871 | NA | 1 | ultimate scaled structural length |
| L_i | cm | 0.758202 | NA | 1 | ultimate structural length |
| M_Vi | mol | 0.00364743 | NA | 1 | ultimate structural mass |
| M_Ei | mol | 0.00609421 | NA | 1 | ultimate reserve mass |
| Ww_i | g | 1.16413 | NA | 1 | ultimate wet weight |
| Wd_i | g | 0.232825 | NA | 1 | ultimate dry weight |
| E_Wi | J | 5175.53 | NA | 1 | ultimate energy content |
| xi_WE | kJ/ g | 22.2293 | NA | 1 | whole-body energy density of dry biomass (no reprod buffer) |
| del_Wb | - | 0.000169952 | NA | 1 | birth weight as fraction of maximum weight |
| del_Wp | - | 0.243373 | NA | 1 | puberty weight as fraction of maximum weight |
| del_V | - | 0.374416 | NA | 1 | fraction of max weight that is structure |
| h_W | 1/d | 0.000236406 | 20 | 1 | Weibull ageing rate |
| h_G | 1/d | 0.105519 | 20 | 1 | Gompertz aging rate |
| S_b | - | 1 | NA | 1 | survival probability at birth |
| S_j | - | 0.999994 | NA | 1 | survival probability at metam |
| S_p | - | 0.687137 | NA | 1 | survival probability at puberty |
| a_m | d | 120.626 | 20 | 1 | life span |
| a_99 | d | 471.895 | 20 | 1 | age at length 0.99 * L_i |
| R_i | 1/d | 97.3873 | 20 | 1 | ultimate reproduction rate |
| N_i | # | 564.057 | NA | 1 | life time reproductive output |
| M_E0_min_G | mol | 2.43883e-06 | NA | NA | egg mass whereby growth ceases at birth |
| M_E0_min_R | mol | 2.29538e-06 | NA | NA | egg mass whereby maturation ceases at birth |
| eb_min_G | - | 0.183655 | NA | NA | scaled reserve density whereby growth ceases at birth |
| eb_min_R | - | 0.0105866 | NA | NA | scaled reserve density whereby maturation ceases at birth |
| ep_min | - | 0.340981 | NA | NA | scaled reserve density whereby maturation and growth cease at puberty |
| sM_min | - | 2.92425 | NA | NA | acceleration factor whereby maturation ceases at puberty |
| p_Xb | J/d | 0.332311 | 20 | 1 | food intake at birth |
| J_Xb | mol/d | 6.32973e-07 | 20 | 1 | food intake at birth |
| F_mb | l/d | 0.0114648 | 20 | 1 | max searching rate at birth |
| p_Xp | J/d | 42.2191 | 20 | 1 | food intake at puberty |
| J_Xp | mol/d | 8.04174e-05 | 20 | 1 | food intake at puberty |
| F_mp | l/d | 1.45657 | 20 | 1 | max searching rate at puberty |
| p_Xi | J/d | 108.308 | 20 | 1 | ultimate food intake |
| J_Xi | mol/d | 0.000206301 | 20 | 1 | ultimate food intake |
| F_mi | l/d | 3.73665 | 20 | 1 | max ultimate searching rate |
| p_Ab | J/d | 0.265868 | 20 | 1 | assimilation at birth |
| p_Cb | J/d | 0.19195 | 20 | 1 | mobilisation at birth |
| p_Sb | J/d | 0.0180019 | 20 | 1 | somatic maintenance at birth |
| p_Jb | J/d | 0.00158521 | 20 | 1 | maturity maintenance at birth |
| p_Gb | J/d | 0.0506316 | 20 | 1 | growth at birth |
| p_Rb | J/d | 0.121731 | 20 | 1 | maturation at birth |
| p_Db | J/d | 0.141318 | 20 | 1 | dissipation at birth |
| p_Ap | J/d | 115.468 | 20 | 1 | assimilation at puberty |
| p_Cp | J/d | 100.591 | 20 | 1 | mobilisation at puberty |
| p_Sp | J/d | 25.7771 | 20 | 1 | somatic maintenance at puberty |
| p_Jp | J/d | 4.722 | 20 | 1 | maturity maintenance at puberty |
| p_Gp | J/d | 10.1902 | 20 | 1 | growth at puberty |
| p_Rp | J/d | 59.9018 | 20 | 1 | reproduction at puberty |
| p_Dp | J/d | 90.4009 | 20 | 1 | dissipation at puberty |
| p_Ai | J/d | 296.219 | 20 | 1 | ultimate assimilation |
| p_Ci | J/d | 296.219 | 20 | 1 | ultimate mobilisation |
| p_Si | J/d | 105.916 | 20 | 1 | ultimate somatic maintenance |
| p_Ji | J/d | 4.722 | 20 | 1 | ultimate maturity maintenance |
| p_Gi | J/d | 0 | 20 | 1 | ultimate growth |
| p_Ri | J/d | 185.581 | 20 | 1 | ultimate reproduction |
| p_Di | J/d | 119.917 | 20 | 1 | ultimate dissipation |
| J_Cb | mol/d | 3.48949e-07 | 20 | 1 | CO2 flux at birth |
| J_Cp | mol/d | 0.000201616 | 20 | 1 | CO2 flux at puberty |
| J_Ci | mol/d | 0.000307595 | 20 | 1 | ultimate CO2 flux |
| J_Hb | mol/d | 2.51049e-07 | 20 | 1 | water flux at birth |
| J_Hp | mol/d | 0.000145052 | 20 | 1 | water flux at puberty |
| J_Hi | mol/d | 0.000221297 | 20 | 1 | ultimate water flux |
| J_Ob | mol/d | 3.79482e-07 | 20 | 1 | O2 flux at birth |
| J_Op | mol/d | 0.000219258 | 20 | 1 | O2 flux at puberty |
| J_Oi | mol/d | 0.000334509 | 20 | 1 | ultimate O2 flux |
| J_Nb | mol/d | 5.23423e-08 | 20 | 1 | N-waste flux at birth |
| J_Np | mol/d | 3.02424e-05 | 20 | 1 | N-waste flux at puberty |
| J_Ni | mol/d | 4.61392e-05 | 20 | 1 | ultimate N-waste flux |
| RQ_b | mol C/mol O | 0.91954 | NA | 1 | resp quotient at birth |
| UQ_b | mol N/mol O | 0.137931 | NA | 1 | urine quotient at birth |
| WQ_b | mol H/mol O | 0.62069 | NA | 1 | water quotient at birth |
| SDA_b | mol O/mol X | 0.1381 | NA | 1 | specific dynamic action at birth |
| VO_b | L/h.g | -0.0071794 | 20 | 1 | dioxygen use per gram max dry weight, <J_OD> at birth |
| p_Tb | J/d | 0.184965 | 20 | 1 | total heat at birth |
| RQ_p | mol C/mol O | 0.91954 | NA | 1 | resp quotient at puberty |
| UQ_p | mol N/mol O | 0.137931 | NA | 1 | urine quotient at puberty |
| WQ_p | mol H/mol O | 0.62069 | NA | 1 | water quotient at puberty |
| SDA_p | mol O/mol X | 0.1381 | NA | 1 | specific dynamic action at puberty |
| VO_p | L/h.g | -0.00320713 | 20 | 1 | dioxygen use per gram max dry weight, <J_OD> at puberty |
| p_Tp | J/d | 106.93 | 20 | 1 | total heat at puberty |
| RQ_i | mol C/mol O | 0.91954 | NA | 1 | ultimate resp quotient |
| UQ_i | mol N/mol O | 0.137931 | NA | 1 | ultimate urine quotient |
| WQ_i | mol H/mol O | 0.62069 | NA | 1 | ultimate water quotient |
| SDA_i | mol O/mol X | 0.1381 | NA | 1 | ultimate specific dynamic action |
| VO_i | L/h.g | -0.00103537 | 20 | 1 | ultimate dioxygen use per gram max dry weight, <J_OD> |
| p_Ti | J/d | 156.945 | 20 | 1 | ultimate total heat |