Predictions & Data for this entry

Model: abj climate: MC migrate: phylum:
COMPLETE = 5.5 ecozone: MPSW food: biPp class:
MRE = 0.134 habitat: 0jMp, jiMb, jiMi gender: D order:
SMSE = 0.062 embryo: Mp reprod: O family:

Zero-variate data

Data Observed Predicted (RE) Unit Description Reference
ab 4 1.93 (0.5174) d age at birth Rusk2012, RuskAlfa2017
tj 16 17.65 (0.1031) d time since birth at metamorphosis Rusk2012
tp 150 134.4 (0.1039) d time since birth at puberty guess
am 7300 7059 (0.03304) d life span guess
Lb 0.0111 0.007383 (0.3349) cm shell length at birth Rusk2012, RuskAlfa2017
Lj 0.028 0.03227 (0.1524) cm shell length at metamorphosis RaggGale2019
Lp 2.7 2.971 (0.1003) cm shell length at puberty Alfa2001
Li 14.5 19.48 (0.3432) cm ultimate total length Alfa2001
Wdb 5.669e-08 2.746e-08 (0.5155) g ash free dry weight at birth Rusk2012, RaggGale2019
Wdj 1.8e-06 1.493e-06 (0.1708) g ash free dry weight at metamorphosis RaggGale2019
Wdp 0.15 0.1012 (0.3252) g dry weight at puberty NIWA
Wdi 35 28.52 (0.1851) g ultimate dry weight guess
GSI 0.14 0.2106 (0.5044) - gonado somatic index NIWA
Ri 2.74e+05 3.813e+05 (0.3916) #/d maximum reprod rate Jenk1979, ChenRagg2020
E0 0.0004 0.0006267 (0.5668) J energy content of an egg ChenRagg2020

Uni- and bivariate data

Data Figure Independent variable Dependent variable (RE) Reference
tL2 Growth at two culture sites time since birth length (0.02271) NIWA
tL1 Growth at two culture sites time since birth length (0.02315) NIWA
tWd2 time dry weight (0.1059) NIWA
tWd1 time dry weight (0.07055) NIWA
LWt_20 length total wet weight (3.201) ChenRagg2020
LWt_18 length total wet weight (3.618) ChenRagg2020
LN_20 length number of spawned eggs (0.4548) ChenRagg2020
LN_18 length number of spawned eggs (0.4696) ChenRagg2020
LWt_f5 length total wet weight, exp1 (0.06261) ChenRagg2020
LWt_f4 length total wet weight, exp1 (0.04109) ChenRagg2020
LWt_f3 length total wet weight, exp1 (0.04591) ChenRagg2020
LWt_f2 length total wet weight, exp1 (0.04919) ChenRagg2020
LWafd_f5_E2 length ash-free dry flesh weight, exp2 (0.2011) ChenRagg2020
LWafd_f4_E2 length ash-free dry flesh weight, exp2 (0.2746) ChenRagg2020
LWafd_f3_E2 length ash-free dry flesh weight, exp2 (0.2123) ChenRagg2020
LWafd_f2_E2 length ash-free dry flesh weight, exp2 (0.2676) ChenRagg2020
LWt_f5_E2 length total wet weight, exp2 (0.06517) ChenRagg2020
LWt_f4_E2 length total wet weight, exp2 (0.05735) ChenRagg2020
LWt_f3_E2 length total wet weight, exp2 (0.03742) ChenRagg2020
LWt_f2_E2 length total wet weight, exp2 (0.03685) ChenRagg2020
LWw_f5_E2 length wet flesh weight, exp2 (0.1176) ChenRagg2020
LWw_f4_E2 length wet flesh weight, exp2 (0.1589) ChenRagg2020
LWw_f3_E2 length wet flesh weight, exp2 (0.1359) ChenRagg2020
LWw_f2_E2 length wet flesh weight, exp2 (0.1555) ChenRagg2020
LWd_f5_E2 length dry flesh weight, exp2 (0.1837) ChenRagg2020
LWd_f4_E2 length dry flesh weight, exp2 (0.2658) ChenRagg2020
LWd_f3_E2 length dry flesh weight, exp2 (0.189) ChenRagg2020
LWd_f2_E2 length dry flesh weight, exp2 (0.2297) ChenRagg2020
LEn_f5_E2 length energy per mussel (0.1877) ChenRagg2020
LEn_f4_E2 length energy per mussel (0.3367) ChenRagg2020
LEn_f3_E2 length energy per mussel (0.2505) ChenRagg2020
LEn_f2_E2 length energy per mussel (0.312) ChenRagg2020
tWt_f5 time total wet weight, exp1 (0.05556) ChenRagg2020
tWt_f4 time total wet weight, exp1 (0.03349) ChenRagg2020
tWt_f3 time total wet weight, exp1 (0.02232) ChenRagg2020
tWt_f2 time total wet weight, exp1 (0.03779) ChenRagg2020
WtdWt_f5 total wet weight change in total wet weight (122.6) ChenRagg2020
WtdWt_f4 total wet weight change in total wet weight (347.7) ChenRagg2020
WtdWt_f3 total wet weight change in total wet weight (285.5) ChenRagg2020
WtdWt_f2 total wet weight change in total wet weight (311.5) ChenRagg2020
tL_f5 time length (0.007778) ChenRagg2020
tL_f4 time length (0.01079) ChenRagg2020
tL_f3 time length (0.008691) ChenRagg2020
tL_f2 time length (0.003933) ChenRagg2020
LdL_f5 diameter change in diameter, exp1 (121) ChenRagg2020
LdL_f4 diameter change in diameter, exp1 (322.8) ChenRagg2020
LdL_f3 diameter change in diameter, exp1 (273.9) ChenRagg2020
LdL_f2 diameter change in diameter, exp1 (361.6) ChenRagg2020
LdL_f5_EXP2 diameter change in diameter, exp2 (59.92) ChenRagg2020
LdL_f4_EXP2 diameter change in diameter, exp2 (93.6) ChenRagg2020
LdL_f3_EXP2 diameter change in diameter, exp2 (100.8) ChenRagg2020
LdL_f2_EXP2 diameter change in diameter, exp2 (148.6) ChenRagg2020
LJO_f5 length O_2 consumption (0.2556) ChenRagg2020
LJO_f4 length O_2 consumption (0.3358) ChenRagg2020
LJO_f3 length O_2 consumption (0.3253) ChenRagg2020
LJO_f2 length O_2 consumption (0.2671) ChenRagg2020
WwJX_f5 wet flesh weight algae consumption (0.2752) ChenRagg2020
WwJX_f4 wet flesh weight algae consumption (0.2893) NIWA
WwJX_f3 wet flesh weight algae consumption (0.4886) ChenRagg2020
WwJX_f2 wet flesh weight algae consumption (0.9922) NIWA
WtdWt_f5_EXP2 total wet weight change in total wet weight (62.23) ChenRagg2020
WtdWt_f4_EXP2 total wet weight change in total wet weight (121.2) ChenRagg2020
WtdWt_f3_EXP2 total wet weight change in total wet weight (110.6) ChenRagg2020
WtdWt_f2_EXP2 total wet weight change in total wet weight (140.6) ChenRagg2020
tL0 time since birth length (0.1443) Rusk2012

Pseudo-data at Tref = 20°C

Data Generalised animal Perna canaliculus Unit Description
v 0.02 0.01359 cm/d energy conductance
p_M 18 26.59 J/d.cm^3 vol-spec som maint
k_J 0.002 0.002 1/d maturity maint rate coefficient
k 0.3 0.2675 - maintenance ratio
kap 0.8 0.8576 - allocation fraction to soma
kap_G 0.8 0.812 - growth efficiency
kap_R 0.95 0.95 - reproduction efficiency

Discussion

  • mod_1-DATA: replaced values for 0-variate data: ab, Lb, Wdb, Wdp, Wdi i Ri; added 0-variate data:aj, Lj, Wdj, and 1-variate t-L for juvenilesdifferent equation for EWd predictions in predict file
  • mod_1-PARS: Parameters for the 5-par Arrhenius correction estimated on independent data with NelderMead (outside AmP routine); specific tissue densities corrected to measured values

Facts

  • Entry version 2024/03/08 is linked to a following publication: Cheng, M.C.F., Gecek, S., Marn, N.*, Giacoletti,A., Sara, G., King,N., Ragg, N.L.C. From Lab to Ocean: Leveraging targeted experiments for advancements in mussel aquaculture modeling, submitted to Aquaculture (Ref: ChenGece2024)

Bibliography

Citation